Question - What does the Shannon Wiener index tell us?

Answered by: Sara Rogers  |  Category: General  |  Last Updated: 16-06-2022  |  Views: 1483  |  Total Questions: 13

Shannon index In ecology, pi is often the proportion of individuals belonging to the ith species in the dataset of interest. Then the Shannon entropy quantifies the uncertainty in predicting the species identity of an individual that is taken at random from the dataset. Methods: The Shannon diversity index (H) is another index that is commonly used to characterize species diversity in a community. Like Simpson's index, Shannon's index accounts for both abundance and evenness of the species present. Equitability assumes a value between 0 and 1 with 1 being complete evenness. This normalizes the Shannon diversity index to a value between 0 and 1. Note that lower values indicate more diversity while higher values indicate less diversity. Specifically, an index value of 1 means that all groups have the same frequency. Some analysts use 1 - E(H) so that higher values indicate higher diversity. The Shannon index increases as both the richness and the evenness of the community increase. It is a strength because it provides a simple, synthetic summary, but it is a weakness because it makes it difficult to compare communities that differ greatly in richness. The Shannon-Wiener diversity index (H) is a measure of diversity that combines species richness (the number of species in a given area) and their relative abundances.

https://www.tutorialspoint.com/statistics/shannon_wiener_diversity_index.htm

Statistics - Shannon Wiener Diversity Index pi = proportion of total sample represented by species i. Divide no. of individuals of species i by total number of samples. S = number of species, = species richness. Hmax=ln(S) = Maximum diversity possible. E = Evenness = HHmax.

https://www.hindawi.com/journals/ijfr/2016/7593681/

This index takes both species abundance and species richness into account: where equals the number of species and equals the ratio of individuals of species divided by all individuals of all species. The Shannon diversity index ranges typically from 1. 5 to 3. 5 and rarely reaches 4. 5 [18].

https://www.webpages.uidaho.edu/veg_measure/Modules/Lessons/Module%209(Composition&Diversity)/9_2_Bi

Biodiversity is a measure that combines richness and evenness across species. It is often measured because high biodiversity is perceived a synonymous with ecosystem health. some species work together so that both can survive (called commensalism) and therefore, diverse communities can be more stable.

https://geographyfieldwork.com/Simpson'sDiversityIndex.htm

As species richness and evenness increase, so diversity increases. n = the total number of organisms of a particular species. N = the total number of organisms of all species. The value of D ranges between 0 and 1. With this index, 1 represents infinite diversity and 0, no diversity.

https://sciencing.com/calculate-species-evenness-2851.html

Divide Shannon's diversity index H by natural logarithm of species richness ln(S) to calculate the species evenness. In the example, 0. 707 divided by 1. 099 equals 0. 64. Note that species evenness ranges from zero to one, with zero signifying no evenness and one, a complete evenness.

There are also many challenges when measuring species diversity. The greatest of which is a lack of available data. Conducting a full count of the number of species in an ecosystem is nearly impossible, so researchers must use sample plots at a variety of sites but must avoid repetitive counting.

https://tools.mheducation.ca/web_resources/sch/ON_Sci_9_Unit1_Sec31.pdf

Scientists use several methods to measure biodiversity. These include canopy fogging, quadrat sampling, transect sampling, and netting. The method used depends on the types of organisms ecologists are counting and on the habitat.

https://www.flutterbys.com.au/stats/tut/tut13.2.html

Margalef's index is the number of species (n) minus 1 divided by the natural logarithm of the total number of individuals (N). D=frac{n-1}{ln N} > n<-apply(data[, -1]>0, 1, sum) > N <- apply(data[, -1], 1, sum) > (n-1)/log(N)

https://www.statisticshowto.datasciencecentral.com/simpsons-diversity-index/

Simpson's diversity index (SDI) measures community diversity. Although it's commonly used to measure biodiversity, it can also be used to gauge diversity differences in populations in schools, communities and other locations. The range is from 0 to 1, where: High scores (close to 1) indicate high diversity.

https://www.researchgate.net/post/Which_biodiversity_index_is_more_reliable_better_and_how_can_it_be

As for accounting diversity in any number of sites, Shannon-Weiner Index has been considered to be a better index as compared to Simpson's index. In fact Simpson index is considered more as a dominance index as it accounts proportion of species in a sample.

https://www.biointeractive.org/sites/default/files/WildCam_Biodiversity_Tutorial.xlsx

Species richness is the number of species in a given area. To calculate species richness, you will count the number of cells below each vegetation type that contains a species name. The function =COUNTIF(range, "*") will calculate the total number of cells you highlight that contain any text.

https://www.webpages.uidaho.edu/range357/notes/diversity.pdf

Species Richness = an index based on the number of species i. Numerical species richness = number of species per specified number of individual ii. Species density = number of species per unit are iii. Simple and easy to calculate and therefore intuitively appealing.

https://www.coursehero.com/file/24813224/5Exploring-Biodiversity-with-Ants-Qdocx/

The maximum possible value of diversity for the Shannon index is 1 with 1 being complete evenness and zero being no diversity.